Package: lumbermark 0.9.1

lumbermark: Resistant Clustering via Chopping Up Mutual Reachability Minimum Spanning Trees

Implements a fast and resistant divisive clustering algorithm which identifies a specified number of clusters: 'lumbermark' iteratively chops off sizeable limbs that are joined by protruding segments of a dataset's mutual reachability minimum spanning tree (Gagolewski, 2026 <doi:10.48550/arXiv.2604.07143>). The use of a mutual reachability distance pulls peripheral points farther away from each other. It is a viable alternative to the 'HDBSCAN*' algorithm and can be viewed as a divisive version of Genie. The resulting partitions of different granularities are properly nested. When combined with the 'deadwood' package, it can act as an outlier detector. The 'Python' version of 'lumbermark' is available via 'PyPI'.

Authors:Marek Gagolewski [aut, cre, cph]

lumbermark_0.9.1.tar.gz
lumbermark_0.9.1.zip(r-4.7-x86_64)lumbermark_0.9.1.zip(r-4.7-arm64)lumbermark_0.9.1.zip(r-4.6-x86_64)lumbermark_0.9.1.zip(r-4.6-arm64)lumbermark_0.9.1.zip(r-4.5-x86_64)
lumbermark_0.9.1.tgz(r-4.6-x86_64)lumbermark_0.9.1.tgz(r-4.6-arm64)lumbermark_0.9.1.tgz(r-4.5-x86_64)lumbermark_0.9.1.tgz(r-4.5-arm64)
lumbermark_0.9.1.tar.gz(r-4.7-arm64)lumbermark_0.9.1.tar.gz(r-4.7-x86_64)lumbermark_0.9.1.tar.gz(r-4.6-arm64)lumbermark_0.9.1.tar.gz(r-4.6-x86_64)
lumbermark_0.9.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
lumbermark/json (API)

# Install 'lumbermark' in R:
install.packages('lumbermark', repos = c('https://gagolews.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gagolews/lumbermark/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

anomaly-detectioncluster-analysisclusteringclustering-algorithmhdbscanmachine-learningmachine-learning-algorithmsminimum-spanning-treeminimum-spanning-treesoutlier-detectionoutlierscpp

4.04 score 329 downloads 1 exports 3 dependencies

Last updated from:b267952385. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK118
linux-devel-x86_64OK112
source / vignettesOK195
linux-release-arm64OK116
linux-release-x86_64OK158
macos-release-arm64OK124
macos-release-x86_64OK205
macos-oldrel-arm64OK98
macos-oldrel-x86_64OK306
windows-devel-arm64OK172
windows-devel-x86_64OK173
windows-release-arm64OK188
windows-release-x86_64OK80
windows-oldrel-x86_64OK95
wasm-releaseOK115

Exports:lumbermark

Dependencies:deadwoodquitefastmstRcpp

Readme and manuals

Help Manual

Help pageTopics
Lumbermark: Fast and Robust Clusteringlumbermark lumbermark.default lumbermark.dist lumbermark.mst