Package: genie 1.0.6.9002

genie: Fast, Robust, and Outlier Resistant Hierarchical Clustering

Includes the reference implementation of Genie - a hierarchical clustering algorithm that links two point groups in such a way that an inequity measure (namely, the Gini index) of the cluster sizes does not significantly increase above a given threshold. This method most often outperforms many other data segmentation approaches in terms of clustering quality as tested on a wide range of benchmark datasets. At the same time, Genie retains the high speed of the single linkage approach, therefore it is also suitable for analysing larger data sets. For more details see (Gagolewski et al. 2016 <doi:10.1016/j.ins.2016.05.003>). For an even faster and more feature-rich implementation, including, amongst others, noise point detection, see the 'genieclust' package (Gagolewski, 2021 <doi:10.1016/j.softx.2021.100722>).

Authors:Marek Gagolewski [aut, cre, cph], Maciej Bartoszuk [aut], Anna Cena [aut]

genie_1.0.6.9002.tar.gz
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genie_1.0.6.9002.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
genie/json (API)

# Install 'genie' in R:
install.packages('genie', repos = c('https://gagolews.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gagolews/genie/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

clustercluster-analysisclusteringdata-analysisdata-miningdata-sciencedatasciencegeniehierarchical-clustering-algorithmmachine-learningmachine-learning-algorithmsoutlierscppopenmp

4.64 score 22 stars 20 scripts 435 downloads 1 exports 4 dependencies

Last updated from:cf74c698e0. Checks:11 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64WARNING139
linux-devel-x86_64WARNING130
source / vignettesOK175
linux-release-arm64WARNING135
linux-release-x86_64WARNING128
macos-release-arm64WARNING97
macos-release-x86_64WARNING296
macos-oldrel-arm64WARNING93
macos-oldrel-x86_64WARNING388
windows-develWARNING138
windows-releaseWARNING148
windows-oldrelWARNING154
wasm-releaseOK146

Exports:hclust2

Dependencies:deadwoodgenieclustquitefastmstRcpp