Package: genie 1.0.6.9002

genie: Fast, Robust, and Outlier Resistant Hierarchical Clustering

Includes the reference implementation of Genie - a hierarchical clustering algorithm that links two point groups in such a way that an inequity measure (namely, the Gini index) of the cluster sizes does not significantly increase above a given threshold. This method most often outperforms many other data segmentation approaches in terms of clustering quality as tested on a wide range of benchmark datasets. At the same time, Genie retains the high speed of the single linkage approach, therefore it is also suitable for analysing larger data sets. For more details see (Gagolewski et al. 2016 <doi:10.1016/j.ins.2016.05.003>). For an even faster and more feature-rich implementation, including, amongst others, noise point detection, see the 'genieclust' package (Gagolewski, 2021 <doi:10.1016/j.softx.2021.100722>).

Authors:Marek Gagolewski [aut, cre, cph], Maciej Bartoszuk [aut], Anna Cena [aut]

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genie_1.0.6.9002.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
genie/json (API)

# Install 'genie' in R:
install.packages('genie', repos = c('https://gagolews.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gagolews/genie/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

clustercluster-analysisclusteringdata-analysisdata-miningdata-sciencedatasciencegeniehierarchical-clustering-algorithmmachine-learningmachine-learning-algorithmsoutlierscppopenmp

4.64 score 22 stars 20 scripts 464 downloads 1 exports 4 dependencies

Last updated from:cf74c698e0. Checks:13 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64WARNING140
linux-devel-x86_64WARNING121
source / vignettesOK184
linux-release-arm64WARNING137
linux-release-x86_64WARNING117
macos-release-arm64WARNING130
macos-release-x86_64WARNING290
macos-oldrel-arm64WARNING138
macos-oldrel-x86_64WARNING200
windows-devel-arm64WARNING205
windows-devel-x86_64WARNING131
windows-release-arm64WARNING222
windows-release-x86_64WARNING118
windows-oldrel-x86_64WARNING116
wasm-releaseOK102

Exports:hclust2

Dependencies:deadwoodgenieclustquitefastmstRcpp