Package: genie 1.0.6.9002

genie: Fast, Robust, and Outlier Resistant Hierarchical Clustering

Includes the reference implementation of Genie - a hierarchical clustering algorithm that links two point groups in such a way that an inequity measure (namely, the Gini index) of the cluster sizes does not significantly increase above a given threshold. This method most often outperforms many other data segmentation approaches in terms of clustering quality as tested on a wide range of benchmark datasets. At the same time, Genie retains the high speed of the single linkage approach, therefore it is also suitable for analysing larger data sets. For more details see (Gagolewski et al. 2016 <doi:10.1016/j.ins.2016.05.003>). For an even faster and more feature-rich implementation, including, amongst others, noise point detection, see the 'genieclust' package (Gagolewski, 2021 <doi:10.1016/j.softx.2021.100722>).

Authors:Marek Gagolewski [aut, cre, cph], Maciej Bartoszuk [aut], Anna Cena [aut]

genie_1.0.6.9002.tar.gz
genie_1.0.6.9002.zip(r-4.7)genie_1.0.6.9002.zip(r-4.6)genie_1.0.6.9002.zip(r-4.5)
genie_1.0.6.9002.tgz(r-4.6-x86_64)genie_1.0.6.9002.tgz(r-4.6-arm64)genie_1.0.6.9002.tgz(r-4.5-x86_64)genie_1.0.6.9002.tgz(r-4.5-arm64)
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genie_1.0.6.9002.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
genie/json (API)
NEWS

# Install 'genie' in R:
install.packages('genie', repos = c('https://gagolews.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gagolews/genie/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

clustercluster-analysisclusteringdata-analysisdata-miningdata-sciencedatasciencegeniehierarchical-clustering-algorithmmachine-learningmachine-learning-algorithmsoutlierscppopenmp

4.64 score 22 stars 20 scripts 372 downloads 1 exports 4 dependencies

Last updated from:cf74c698e0. Checks:11 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64WARNING135
linux-devel-x86_64WARNING134
source / vignettesOK207
linux-release-arm64WARNING122
linux-release-x86_64WARNING119
macos-release-arm64WARNING115
macos-release-x86_64WARNING189
macos-oldrel-arm64WARNING105
macos-oldrel-x86_64WARNING260
windows-develWARNING117
windows-releaseWARNING107
windows-oldrelWARNING124
wasm-releaseOK118

Exports:hclust2

Dependencies:deadwoodgenieclustquitefastmstRcpp